WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38C1AB.8a Sequence Name  Y38C1AB.8a
Length (nt)  4656   Chromosome Location  IV: 32953-33173
Chromosome . Primary Identifier  IV Chromosome Location . Start  32953
Chromosome Location . End  33173
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C1AB.8a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48566 FRM-5.1, isoform a 171.8 1551 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00052503
WBRNAi00055997
WBRNAi00055999
WBRNAi00056000
WBRNAi00114830
WBRNAi00010790
WBRNAi00018048
WBRNAi00018225
WBRNAi00020254
WBRNAi00020256

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y38C1AB.8a 32953 33173 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001492 frm-5.1 Y38C1AB.8 Caenorhabditis elegans

21 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y38C1AB.8a 32953 33173 -1
CDS:Y38C1AB.8a 33845 34175 -1
CDS:Y38C1AB.8a 34536 34694 -1
CDS:Y38C1AB.8a 35082 35410 -1
CDS:Y38C1AB.8a 36458 36611 -1
CDS:Y38C1AB.8a 39331 39527 -1
CDS:Y38C1AB.8a 39749 39928 -1
CDS:Y38C1AB.8a 40023 40174 -1
CDS:Y38C1AB.8a 40425 40567 -1
CDS:Y38C1AB.8a 41176 41620 -1
CDS:Y38C1AB.8a 42095 42417 -1
CDS:Y38C1AB.8a 42659 42733 -1
CDS:Y38C1AB.8a 42834 42970 -1
CDS:Y38C1AB.8a 45106 45181 -1
CDS:Y38C1AB.8a 45652 46254 -1
CDS:Y38C1AB.8a 46378 46594 -1
CDS:Y38C1AB.8a 46814 47235 -1
CDS:Y38C1AB.8a 47791 47872 -1
CDS:Y38C1AB.8a 48276 48502 -1
CDS:Y38C1AB.8a 48559 48693 -1
CDS:Y38C1AB.8a 48797 48844 -1

1 Sequence

Length
4656

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38C1AB.8a.1 Y38C1AB.8a.1 5182   IV: 32463-48880