WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38C1AB.8e Sequence Name  Y38C1AB.8e
Length (nt)  2769   Chromosome Location  IV: 32953-33173
Chromosome . Primary Identifier  IV Chromosome Location . Start  32953
Chromosome Location . End  33173
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C1AB.8e

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54453 FRM-5.1, isoform e 102.5 922 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00055997
WBRNAi00055999
WBRNAi00056000
WBRNAi00114830
WBRNAi00018048
WBRNAi00020254

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y38C1AB.8e 32953 33173 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001492 frm-5.1 Y38C1AB.8 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y38C1AB.8e 32953 33173 -1
CDS:Y38C1AB.8e 33845 34175 -1
CDS:Y38C1AB.8e 34536 34694 -1
CDS:Y38C1AB.8e 35082 35410 -1
CDS:Y38C1AB.8e 36458 36611 -1
CDS:Y38C1AB.8e 39331 39527 -1
CDS:Y38C1AB.8e 39749 39928 -1
CDS:Y38C1AB.8e 40023 40174 -1
CDS:Y38C1AB.8e 40425 40567 -1
CDS:Y38C1AB.8e 40844 40885 -1
CDS:Y38C1AB.8e 41176 41620 -1
CDS:Y38C1AB.8e 42095 42417 -1
CDS:Y38C1AB.8e 42659 42733 -1
CDS:Y38C1AB.8e 42834 42851 -1

1 Sequence

Length
2769

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38C1AB.8e.1 Y38C1AB.8e.1 2769   IV: 32953-42851