WormMine: MRNA Transcript:Y38C1AB.8a.1

• WormMine ID: Transcript:Y38C1AB.8a.1
• Sequence Name: Y38C1AB.8a.1
• Length (nt): 5182
• Chromosome Location: IV: 32463-48880
• Chromosome . Primary Identifier: IV
• Chromosome Location . Start: 32463
• Chromosome Location . End: 48880
• Method: Coding_transcript

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: Y38C1AB.8a.1

Genomics

1 Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00001492	frm-5.1	Y38C1AB.8	Caenorhabditis elegans

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:Y38C1AB.8a	Y38C1AB.8a	4656	IV: 32953-33173

1 Chromosome

• WormBase ID: IV
• Organism: Caenorhabditis elegans
• Length (nt): 17493829

1 Chromosome Location

• Feature . Primary Identifier: Transcript:Y38C1AB.8a.1
• Start: 32463
• End: 48880
• Strand: -1

3 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)
• WormBase C. elegans transcript sequence (Fasta)

21 Exons

WormBase ID	Name	Sequence Name	Length (nt)	Chromosome Location	Organism
Exon110031			711	IV: 32463-33173	Caenorhabditis elegans
Exon110036			331	IV: 33845-34175	Caenorhabditis elegans
Exon110042			159	IV: 34536-34694	Caenorhabditis elegans
Exon110048			329	IV: 35082-35410	Caenorhabditis elegans
Exon110054			154	IV: 36458-36611	Caenorhabditis elegans
Exon110065			197	IV: 39331-39527	Caenorhabditis elegans
Exon110071			180	IV: 39749-39928	Caenorhabditis elegans
Exon110077			152	IV: 40023-40174	Caenorhabditis elegans
Exon110083			143	IV: 40425-40567	Caenorhabditis elegans
Exon110092			445	IV: 41176-41620	Caenorhabditis elegans
Exon110099			323	IV: 42095-42417	Caenorhabditis elegans
Exon110105			75	IV: 42659-42733	Caenorhabditis elegans
Exon110113			137	IV: 42834-42970	Caenorhabditis elegans
Exon110117			76	IV: 45106-45181	Caenorhabditis elegans
Exon110121			603	IV: 45652-46254	Caenorhabditis elegans
Exon110125			217	IV: 46378-46594	Caenorhabditis elegans
Exon110129			422	IV: 46814-47235	Caenorhabditis elegans
Exon110133			82	IV: 47791-47872	Caenorhabditis elegans
Exon110137			227	IV: 48276-48502	Caenorhabditis elegans
Exon110141			135	IV: 48559-48693	Caenorhabditis elegans
Exon110147			84	IV: 48797-48880	Caenorhabditis elegans

1 Locations

• Feature . Primary Identifier: Transcript:Y38C1AB.8a.1
• Start: 32463
• End: 48880
• Strand: -1

1 Sequence

• Length: 5182

1 Sequence Ontology Term

• Name: transcript