WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38C1AA.4b Sequence Name  Y38C1AA.4b
Length (nt)  1245   Chromosome Location  IV: 179743-180196
Chromosome . Primary Identifier  IV Chromosome Location . Start  179743
Chromosome Location . End  180196
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C1AA.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48777 TCL-2, isoform b 45.7 414 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00000857
WBRNAi00055985
WBRNAi00061428
WBRNAi00036828

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y38C1AA.4b 179743 180196 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006561 tcl-2 Y38C1AA.4 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y38C1AA.4b 179743 180196 1
CDS:Y38C1AA.4b 180406 180530 1
CDS:Y38C1AA.4b 180866 181324 1
CDS:Y38C1AA.4b 182708 182914 1

1 Sequence

Length
1245

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38C1AA.4b.1 Y38C1AA.4b.1 1245   IV: 179743-182914