WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38C1AA.14b.1 Sequence Name  Y38C1AA.14b.1
Length (nt)  369   Chromosome Location  IV: 206705-207984
Chromosome . Primary Identifier  IV Chromosome Location . Start  206705
Chromosome Location . End  207984 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C1AA.14b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00195063 coa-1 Y38C1AA.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38C1AA.14b Y38C1AA.14b 369   IV: 206705-206815

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y38C1AA.14b.1 206705 207984 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110615   111   IV: 206705-206815 Caenorhabditis elegans
Exon110617   84   IV: 206948-207031 Caenorhabditis elegans
Exon110618   174   IV: 207811-207984 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y38C1AA.14b.1 206705 207984 1

1 Sequence

Length
369

1 Sequence Ontology Term

Identifier Name Description
transcript