WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R02D3.5.1 Sequence Name  R02D3.5.1
Length (nt)  1367   Chromosome Location  IV: 237591-240307
Chromosome . Primary Identifier  IV Chromosome Location . Start  237591
Chromosome Location . End  240307 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R02D3.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019823 fnta-1 R02D3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R02D3.5 R02D3.5 987   IV: 237962-238075

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R02D3.5.1 237591 240307 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110620   485   IV: 237591-238075 Caenorhabditis elegans
Exon110621   244   IV: 238220-238463 Caenorhabditis elegans
Exon110622   505   IV: 239619-240123 Caenorhabditis elegans
Exon110623   133   IV: 240175-240307 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R02D3.5.1 237591 240307 -1

1 Sequence

Length
1367

1 Sequence Ontology Term

Identifier Name Description
transcript