WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R02D3.1a.1 Sequence Name  R02D3.1a.1
Length (nt)  3058   Chromosome Location  IV: 245151-251925
Chromosome . Primary Identifier  IV Chromosome Location . Start  245151
Chromosome Location . End  251925 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R02D3.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019819 aass-1 R02D3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R02D3.1a R02D3.1a 2805   IV: 245197-245300

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R02D3.1a.1 245151 251925 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110683   150   IV: 245151-245300 Caenorhabditis elegans
Exon110684   301   IV: 246249-246549 Caenorhabditis elegans
Exon110686   379   IV: 246601-246979 Caenorhabditis elegans
Exon110688   128   IV: 247026-247153 Caenorhabditis elegans
Exon110690   108   IV: 248584-248691 Caenorhabditis elegans
Exon110693   407   IV: 248926-249332 Caenorhabditis elegans
Exon110695   237   IV: 249903-250139 Caenorhabditis elegans
Exon110697   132   IV: 250375-250506 Caenorhabditis elegans
Exon110699   439   IV: 250555-250993 Caenorhabditis elegans
Exon110701   334   IV: 251041-251374 Caenorhabditis elegans
Exon110704   443   IV: 251483-251925 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R02D3.1a.1 245151 251925 1

1 Sequence

Length
3058

1 Sequence Ontology Term

Identifier Name Description
transcript