WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21D12.9a.2 Sequence Name  T21D12.9a.2
Length (nt)  2936   Chromosome Location  IV: 274420-279943
Chromosome . Primary Identifier  IV Chromosome Location . Start  274420
Chromosome Location . End  279943 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21D12.9a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020649 sma-10 T21D12.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21D12.9a T21D12.9a 2646   IV: 274626-274867

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21D12.9a.2 274420 279943 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110726   138   IV: 274420-274557 Caenorhabditis elegans
Exon110728   266   IV: 274602-274867 Caenorhabditis elegans
Exon110731   72   IV: 275116-275187 Caenorhabditis elegans
Exon110734   75   IV: 275541-275615 Caenorhabditis elegans
Exon110737   138   IV: 275661-275798 Caenorhabditis elegans
Exon110740   144   IV: 275843-275986 Caenorhabditis elegans
Exon110743   216   IV: 276045-276260 Caenorhabditis elegans
Exon110746   213   IV: 276385-276597 Caenorhabditis elegans
Exon110749   228   IV: 276650-276877 Caenorhabditis elegans
Exon110752   505   IV: 276925-277429 Caenorhabditis elegans
Exon110755   286   IV: 277842-278127 Caenorhabditis elegans
Exon110759   297   IV: 278242-278538 Caenorhabditis elegans
Exon110761   133   IV: 279526-279658 Caenorhabditis elegans
Exon110765   225   IV: 279719-279943 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21D12.9a.2 274420 279943 1

1 Sequence

Length
2936

1 Sequence Ontology Term

Identifier Name Description
transcript