WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02D7.1a.2 Sequence Name  K02D7.1a.2
Length (nt)  1204   Chromosome Location  IV: 292423-298304
Chromosome . Primary Identifier  IV Chromosome Location . Start  292423
Chromosome Location . End  298304 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02D7.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019298 pnp-1 K02D7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02D7.1a K02D7.1a 906   IV: 292646-292885

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02D7.1a.2 292423 298304 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110768   463   IV: 292423-292885 Caenorhabditis elegans
Exon110773   97   IV: 293317-293413 Caenorhabditis elegans
Exon110777   227   IV: 293463-293689 Caenorhabditis elegans
Exon110781   289   IV: 293829-294117 Caenorhabditis elegans
Exon110786   84   IV: 294593-294676 Caenorhabditis elegans
Exon110790   44   IV: 298261-298304 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02D7.1a.2 292423 298304 -1

1 Sequence

Length
1204

1 Sequence Ontology Term

Identifier Name Description
transcript