WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F18F11.1.1 Sequence Name  F18F11.1.1
Length (nt)  744   Chromosome Location  IV: 334796-337178
Chromosome . Primary Identifier  IV Chromosome Location . Start  334796
Chromosome Location . End  337178 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18F11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017574 pxmp-4 F18F11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F18F11.1 F18F11.1 633   IV: 334890-335059

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F18F11.1.1 334796 337178 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110843   264   IV: 334796-335059 Caenorhabditis elegans
Exon110844   79   IV: 335112-335190 Caenorhabditis elegans
Exon110845   199   IV: 336433-336631 Caenorhabditis elegans
Exon110846   63   IV: 336932-336994 Caenorhabditis elegans
Exon110847   139   IV: 337040-337178 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F18F11.1.1 334796 337178 -1

1 Sequence

Length
744

1 Sequence Ontology Term

Identifier Name Description
transcript