WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F18F11.3c.1 Sequence Name  F18F11.3c.1
Length (nt)  4860   Chromosome Location  IV: 339808-358882
Chromosome . Primary Identifier  IV Chromosome Location . Start  339808
Chromosome Location . End  358882 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18F11.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017576 cdh-8 F18F11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F18F11.3c F18F11.3c 4860   IV: 339808-339868

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F18F11.3c.1 339808 358882 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110848   61   IV: 339808-339868 Caenorhabditis elegans
Exon110858   101   IV: 340335-340435 Caenorhabditis elegans
Exon110866   93   IV: 341136-341228 Caenorhabditis elegans
Exon110875   87   IV: 345173-345259 Caenorhabditis elegans
Exon110883   153   IV: 345645-345797 Caenorhabditis elegans
Exon110891   92   IV: 345847-345938 Caenorhabditis elegans
Exon110899   108   IV: 345985-346092 Caenorhabditis elegans
Exon110907   322   IV: 346822-347143 Caenorhabditis elegans
Exon110915   108   IV: 347195-347302 Caenorhabditis elegans
Exon110923   129   IV: 348814-348942 Caenorhabditis elegans
Exon110931   325   IV: 350578-350902 Caenorhabditis elegans
Exon110939   125   IV: 351591-351715 Caenorhabditis elegans
Exon110947   222   IV: 351761-351982 Caenorhabditis elegans
Exon110955   372   IV: 352778-353149 Caenorhabditis elegans
Exon110963   365   IV: 353962-354326 Caenorhabditis elegans
Exon110975   171   IV: 354656-354826 Caenorhabditis elegans
Exon110983   601   IV: 354870-355470 Caenorhabditis elegans
Exon110989   93   IV: 355802-355894 Caenorhabditis elegans
Exon110995   93   IV: 355936-356028 Caenorhabditis elegans
Exon111003   210   IV: 356285-356494 Caenorhabditis elegans
Exon111011   255   IV: 356545-356799 Caenorhabditis elegans
Exon111023   278   IV: 357352-357629 Caenorhabditis elegans
Exon111032   241   IV: 357731-357971 Caenorhabditis elegans
Exon111041   149   IV: 358550-358698 Caenorhabditis elegans
Exon111049   106   IV: 358777-358882 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F18F11.3c.1 339808 358882 1

1 Sequence

Length
4860

1 Sequence Ontology Term

Identifier Name Description
transcript