WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F18F11.3b.1 Sequence Name  F18F11.3b.1
Length (nt)  4767   Chromosome Location  IV: 339808-358882
Chromosome . Primary Identifier  IV Chromosome Location . Start  339808
Chromosome Location . End  358882 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18F11.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017576 cdh-8 F18F11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F18F11.3b F18F11.3b 4767   IV: 339808-339868

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F18F11.3b.1 339808 358882 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110850   61   IV: 339808-339868 Caenorhabditis elegans
Exon110857   101   IV: 340335-340435 Caenorhabditis elegans
Exon110865   93   IV: 341136-341228 Caenorhabditis elegans
Exon110874   87   IV: 345173-345259 Caenorhabditis elegans
Exon110882   153   IV: 345645-345797 Caenorhabditis elegans
Exon110890   92   IV: 345847-345938 Caenorhabditis elegans
Exon110898   108   IV: 345985-346092 Caenorhabditis elegans
Exon110906   322   IV: 346822-347143 Caenorhabditis elegans
Exon110914   108   IV: 347195-347302 Caenorhabditis elegans
Exon110922   129   IV: 348814-348942 Caenorhabditis elegans
Exon110930   325   IV: 350578-350902 Caenorhabditis elegans
Exon110938   125   IV: 351591-351715 Caenorhabditis elegans
Exon110946   222   IV: 351761-351982 Caenorhabditis elegans
Exon110954   372   IV: 352778-353149 Caenorhabditis elegans
Exon110962   365   IV: 353962-354326 Caenorhabditis elegans
Exon110974   171   IV: 354656-354826 Caenorhabditis elegans
Exon110982   601   IV: 354870-355470 Caenorhabditis elegans
Exon110994   93   IV: 355936-356028 Caenorhabditis elegans
Exon111002   210   IV: 356285-356494 Caenorhabditis elegans
Exon111010   255   IV: 356545-356799 Caenorhabditis elegans
Exon111022   278   IV: 357352-357629 Caenorhabditis elegans
Exon111031   241   IV: 357731-357971 Caenorhabditis elegans
Exon111040   149   IV: 358550-358698 Caenorhabditis elegans
Exon111048   106   IV: 358777-358882 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F18F11.3b.1 339808 358882 1

1 Sequence

Length
4767

1 Sequence Ontology Term

Identifier Name Description
transcript