WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y66H1B.2h.1 Sequence Name  Y66H1B.2h.1
Length (nt)  7129   Chromosome Location  IV: 359232-376015
Chromosome . Primary Identifier  IV Chromosome Location . Start  359232
Chromosome Location . End  376015 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y66H1B.2h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022048 fln-1 Y66H1B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y66H1B.2h Y66H1B.2h 6774   IV: 359584-359619

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2h.1 359232 376015 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111058   388   IV: 359232-359619 Caenorhabditis elegans
Exon111078   228   IV: 359994-360221 Caenorhabditis elegans
Exon111095   161   IV: 360805-360965 Caenorhabditis elegans
Exon111112   254   IV: 361011-361264 Caenorhabditis elegans
Exon111129   533   IV: 361326-361858 Caenorhabditis elegans
Exon111146   852   IV: 361907-362758 Caenorhabditis elegans
Exon111163   395   IV: 362837-363231 Caenorhabditis elegans
Exon111186   109   IV: 363771-363879 Caenorhabditis elegans
Exon111194   153   IV: 363976-364128 Caenorhabditis elegans
Exon111204   99   IV: 364209-364307 Caenorhabditis elegans
Exon111220   581   IV: 367129-367709 Caenorhabditis elegans
Exon111236   186   IV: 367761-367946 Caenorhabditis elegans
Exon111252   159   IV: 368242-368400 Caenorhabditis elegans
Exon111268   172   IV: 368599-368770 Caenorhabditis elegans
Exon111284   329   IV: 368820-369148 Caenorhabditis elegans
Exon111302   100   IV: 371406-371505 Caenorhabditis elegans
Exon111319   555   IV: 371573-372127 Caenorhabditis elegans
Exon111336   536   IV: 372808-373343 Caenorhabditis elegans
Exon111354   277   IV: 373644-373920 Caenorhabditis elegans
Exon111371   563   IV: 373962-374524 Caenorhabditis elegans
Exon111396   174   IV: 374571-374744 Caenorhabditis elegans
Exon111405   172   IV: 375594-375765 Caenorhabditis elegans
Exon111414   114   IV: 375814-375927 Caenorhabditis elegans
Exon111427   39   IV: 375977-376015 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2h.1 359232 376015 -1

1 Sequence

Length
7129

1 Sequence Ontology Term

Identifier Name Description
transcript