WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y66H1B.2l.1 Sequence Name  Y66H1B.2l.1
Length (nt)  7131   Chromosome Location  IV: 359233-376012
Chromosome . Primary Identifier  IV Chromosome Location . Start  359233
Chromosome Location . End  376012 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y66H1B.2l.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022048 fln-1 Y66H1B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y66H1B.2l Y66H1B.2l 6780   IV: 359584-359619

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2l.1 359233 376012 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111059   387   IV: 359233-359619 Caenorhabditis elegans
Exon111082   228   IV: 359994-360221 Caenorhabditis elegans
Exon111099   161   IV: 360805-360965 Caenorhabditis elegans
Exon111116   254   IV: 361011-361264 Caenorhabditis elegans
Exon111133   533   IV: 361326-361858 Caenorhabditis elegans
Exon111150   852   IV: 361907-362758 Caenorhabditis elegans
Exon111167   395   IV: 362837-363231 Caenorhabditis elegans
Exon111188   109   IV: 363771-363879 Caenorhabditis elegans
Exon111196   153   IV: 363976-364128 Caenorhabditis elegans
Exon111208   99   IV: 364209-364307 Caenorhabditis elegans
Exon111224   581   IV: 367129-367709 Caenorhabditis elegans
Exon111240   186   IV: 367761-367946 Caenorhabditis elegans
Exon111256   159   IV: 368242-368400 Caenorhabditis elegans
Exon111272   172   IV: 368599-368770 Caenorhabditis elegans
Exon111288   329   IV: 368820-369148 Caenorhabditis elegans
Exon111306   100   IV: 371406-371505 Caenorhabditis elegans
Exon111323   555   IV: 371573-372127 Caenorhabditis elegans
Exon111340   536   IV: 372808-373343 Caenorhabditis elegans
Exon111358   277   IV: 373644-373920 Caenorhabditis elegans
Exon111379   569   IV: 373962-374530 Caenorhabditis elegans
Exon111400   174   IV: 374571-374744 Caenorhabditis elegans
Exon111409   172   IV: 375594-375765 Caenorhabditis elegans
Exon111418   114   IV: 375814-375927 Caenorhabditis elegans
Exon111426   36   IV: 375977-376012 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2l.1 359233 376012 -1

1 Sequence

Length
7131

1 Sequence Ontology Term

Identifier Name Description
transcript