WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y66H1B.2g.1 Sequence Name  Y66H1B.2g.1
Length (nt)  6965   Chromosome Location  IV: 359240-376012
Chromosome . Primary Identifier  IV Chromosome Location . Start  359240
Chromosome Location . End  376012 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y66H1B.2g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022048 fln-1 Y66H1B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y66H1B.2g Y66H1B.2g 6621   IV: 359584-359619

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2g.1 359240 376012 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111062   380   IV: 359240-359619 Caenorhabditis elegans
Exon111077   228   IV: 359994-360221 Caenorhabditis elegans
Exon111094   161   IV: 360805-360965 Caenorhabditis elegans
Exon111111   254   IV: 361011-361264 Caenorhabditis elegans
Exon111128   533   IV: 361326-361858 Caenorhabditis elegans
Exon111145   852   IV: 361907-362758 Caenorhabditis elegans
Exon111162   395   IV: 362837-363231 Caenorhabditis elegans
Exon111185   109   IV: 363771-363879 Caenorhabditis elegans
Exon111203   99   IV: 364209-364307 Caenorhabditis elegans
Exon111219   581   IV: 367129-367709 Caenorhabditis elegans
Exon111235   186   IV: 367761-367946 Caenorhabditis elegans
Exon111251   159   IV: 368242-368400 Caenorhabditis elegans
Exon111267   172   IV: 368599-368770 Caenorhabditis elegans
Exon111283   329   IV: 368820-369148 Caenorhabditis elegans
Exon111301   100   IV: 371406-371505 Caenorhabditis elegans
Exon111318   555   IV: 371573-372127 Caenorhabditis elegans
Exon111335   536   IV: 372808-373343 Caenorhabditis elegans
Exon111353   277   IV: 373644-373920 Caenorhabditis elegans
Exon111370   563   IV: 373962-374524 Caenorhabditis elegans
Exon111395   174   IV: 374571-374744 Caenorhabditis elegans
Exon111404   172   IV: 375594-375765 Caenorhabditis elegans
Exon111413   114   IV: 375814-375927 Caenorhabditis elegans
Exon111422   36   IV: 375977-376012 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2g.1 359240 376012 -1

1 Sequence

Length
6965

1 Sequence Ontology Term

Identifier Name Description
transcript