WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y66H1B.2f.1 Sequence Name  Y66H1B.2f.1
Length (nt)  6976   Chromosome Location  IV: 359223-376012
Chromosome . Primary Identifier  IV Chromosome Location . Start  359223
Chromosome Location . End  376012 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y66H1B.2f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022048 fln-1 Y66H1B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y66H1B.2f Y66H1B.2f 6615   IV: 359584-359619

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2f.1 359223 376012 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111106   397   IV: 359223-359619 Caenorhabditis elegans
Exon111125   228   IV: 359994-360221 Caenorhabditis elegans
Exon111142   161   IV: 360805-360965 Caenorhabditis elegans
Exon111159   254   IV: 361011-361264 Caenorhabditis elegans
Exon111176   533   IV: 361326-361858 Caenorhabditis elegans
Exon111193   852   IV: 361907-362758 Caenorhabditis elegans
Exon111210   395   IV: 362837-363231 Caenorhabditis elegans
Exon111227   103   IV: 363771-363873 Caenorhabditis elegans
Exon111251   99   IV: 364209-364307 Caenorhabditis elegans
Exon111267   581   IV: 367129-367709 Caenorhabditis elegans
Exon111283   186   IV: 367761-367946 Caenorhabditis elegans
Exon111299   159   IV: 368242-368400 Caenorhabditis elegans
Exon111315   172   IV: 368599-368770 Caenorhabditis elegans
Exon111331   329   IV: 368820-369148 Caenorhabditis elegans
Exon111349   100   IV: 371406-371505 Caenorhabditis elegans
Exon111366   555   IV: 371573-372127 Caenorhabditis elegans
Exon111383   536   IV: 372808-373343 Caenorhabditis elegans
Exon111401   277   IV: 373644-373920 Caenorhabditis elegans
Exon111418   563   IV: 373962-374524 Caenorhabditis elegans
Exon111443   174   IV: 374571-374744 Caenorhabditis elegans
Exon111452   172   IV: 375594-375765 Caenorhabditis elegans
Exon111461   114   IV: 375814-375927 Caenorhabditis elegans
Exon111470   36   IV: 375977-376012 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2f.1 359223 376012 -1

1 Sequence

Length
6976

1 Sequence Ontology Term

Identifier Name Description
transcript