WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y66H1B.2h.1 Sequence Name  Y66H1B.2h.1
Length (nt)  7129   Chromosome Location  IV: 359232-376015
Chromosome . Primary Identifier  IV Chromosome Location . Start  359232
Chromosome Location . End  376015 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y66H1B.2h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022048 fln-1 Y66H1B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y66H1B.2h Y66H1B.2h 6774   IV: 359584-359619

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2h.1 359232 376015 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111107   388   IV: 359232-359619 Caenorhabditis elegans
Exon111127   228   IV: 359994-360221 Caenorhabditis elegans
Exon111144   161   IV: 360805-360965 Caenorhabditis elegans
Exon111161   254   IV: 361011-361264 Caenorhabditis elegans
Exon111178   533   IV: 361326-361858 Caenorhabditis elegans
Exon111195   852   IV: 361907-362758 Caenorhabditis elegans
Exon111212   395   IV: 362837-363231 Caenorhabditis elegans
Exon111235   109   IV: 363771-363879 Caenorhabditis elegans
Exon111243   153   IV: 363976-364128 Caenorhabditis elegans
Exon111253   99   IV: 364209-364307 Caenorhabditis elegans
Exon111269   581   IV: 367129-367709 Caenorhabditis elegans
Exon111285   186   IV: 367761-367946 Caenorhabditis elegans
Exon111301   159   IV: 368242-368400 Caenorhabditis elegans
Exon111317   172   IV: 368599-368770 Caenorhabditis elegans
Exon111333   329   IV: 368820-369148 Caenorhabditis elegans
Exon111351   100   IV: 371406-371505 Caenorhabditis elegans
Exon111368   555   IV: 371573-372127 Caenorhabditis elegans
Exon111385   536   IV: 372808-373343 Caenorhabditis elegans
Exon111403   277   IV: 373644-373920 Caenorhabditis elegans
Exon111420   563   IV: 373962-374524 Caenorhabditis elegans
Exon111445   174   IV: 374571-374744 Caenorhabditis elegans
Exon111454   172   IV: 375594-375765 Caenorhabditis elegans
Exon111463   114   IV: 375814-375927 Caenorhabditis elegans
Exon111476   39   IV: 375977-376015 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2h.1 359232 376015 -1

1 Sequence

Length
7129

1 Sequence Ontology Term

Identifier Name Description
transcript