WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y66H1B.2s.1 Sequence Name  Y66H1B.2s.1
Length (nt)  6225   Chromosome Location  IV: 359584-374664
Chromosome . Primary Identifier  IV Chromosome Location . Start  359584
Chromosome Location . End  374664 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y66H1B.2s.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022048 fln-1 Y66H1B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y66H1B.2s Y66H1B.2s 6225   IV: 359584-359619

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2s.1 359584 374664 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111070   36   IV: 359584-359619 Caenorhabditis elegans
Exon111089   228   IV: 359994-360221 Caenorhabditis elegans
Exon111106   161   IV: 360805-360965 Caenorhabditis elegans
Exon111123   254   IV: 361011-361264 Caenorhabditis elegans
Exon111140   533   IV: 361326-361858 Caenorhabditis elegans
Exon111157   852   IV: 361907-362758 Caenorhabditis elegans
Exon111174   395   IV: 362837-363231 Caenorhabditis elegans
Exon111191   109   IV: 363771-363879 Caenorhabditis elegans
Exon111215   99   IV: 364209-364307 Caenorhabditis elegans
Exon111231   581   IV: 367129-367709 Caenorhabditis elegans
Exon111247   186   IV: 367761-367946 Caenorhabditis elegans
Exon111263   159   IV: 368242-368400 Caenorhabditis elegans
Exon111279   172   IV: 368599-368770 Caenorhabditis elegans
Exon111295   329   IV: 368820-369148 Caenorhabditis elegans
Exon111313   100   IV: 371406-371505 Caenorhabditis elegans
Exon111330   555   IV: 371573-372127 Caenorhabditis elegans
Exon111347   536   IV: 372808-373343 Caenorhabditis elegans
Exon111365   277   IV: 373644-373920 Caenorhabditis elegans
Exon111382   569   IV: 373962-374530 Caenorhabditis elegans
Exon111390   94   IV: 374571-374664 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2s.1 359584 374664 -1

1 Sequence

Length
6225

1 Sequence Ontology Term

Identifier Name Description
transcript