WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y66H1B.2n.1 Sequence Name  Y66H1B.2n.1
Length (nt)  6213   Chromosome Location  IV: 359584-374664
Chromosome . Primary Identifier  IV Chromosome Location . Start  359584
Chromosome Location . End  374664 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y66H1B.2n.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022048 fln-1 Y66H1B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y66H1B.2n Y66H1B.2n 6213   IV: 359584-359619

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2n.1 359584 374664 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111114   36   IV: 359584-359619 Caenorhabditis elegans
Exon111133   228   IV: 359994-360221 Caenorhabditis elegans
Exon111150   161   IV: 360805-360965 Caenorhabditis elegans
Exon111167   254   IV: 361011-361264 Caenorhabditis elegans
Exon111184   533   IV: 361326-361858 Caenorhabditis elegans
Exon111201   852   IV: 361907-362758 Caenorhabditis elegans
Exon111218   395   IV: 362837-363231 Caenorhabditis elegans
Exon111231   103   IV: 363771-363873 Caenorhabditis elegans
Exon111259   99   IV: 364209-364307 Caenorhabditis elegans
Exon111275   581   IV: 367129-367709 Caenorhabditis elegans
Exon111291   186   IV: 367761-367946 Caenorhabditis elegans
Exon111307   159   IV: 368242-368400 Caenorhabditis elegans
Exon111323   172   IV: 368599-368770 Caenorhabditis elegans
Exon111339   329   IV: 368820-369148 Caenorhabditis elegans
Exon111357   100   IV: 371406-371505 Caenorhabditis elegans
Exon111374   555   IV: 371573-372127 Caenorhabditis elegans
Exon111391   536   IV: 372808-373343 Caenorhabditis elegans
Exon111409   277   IV: 373644-373920 Caenorhabditis elegans
Exon111422   563   IV: 373962-374524 Caenorhabditis elegans
Exon111434   94   IV: 374571-374664 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2n.1 359584 374664 -1

1 Sequence

Length
6213

1 Sequence Ontology Term

Identifier Name Description
transcript