WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y66H1B.2t.1 Sequence Name  Y66H1B.2t.1
Length (nt)  6378   Chromosome Location  IV: 359584-374664
Chromosome . Primary Identifier  IV Chromosome Location . Start  359584
Chromosome Location . End  374664 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y66H1B.2t.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022048 fln-1 Y66H1B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y66H1B.2t Y66H1B.2t 6378   IV: 359584-359619

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2t.1 359584 374664 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111071   36   IV: 359584-359619 Caenorhabditis elegans
Exon111090   228   IV: 359994-360221 Caenorhabditis elegans
Exon111107   161   IV: 360805-360965 Caenorhabditis elegans
Exon111124   254   IV: 361011-361264 Caenorhabditis elegans
Exon111141   533   IV: 361326-361858 Caenorhabditis elegans
Exon111158   852   IV: 361907-362758 Caenorhabditis elegans
Exon111175   395   IV: 362837-363231 Caenorhabditis elegans
Exon111192   109   IV: 363771-363879 Caenorhabditis elegans
Exon111200   153   IV: 363976-364128 Caenorhabditis elegans
Exon111216   99   IV: 364209-364307 Caenorhabditis elegans
Exon111232   581   IV: 367129-367709 Caenorhabditis elegans
Exon111248   186   IV: 367761-367946 Caenorhabditis elegans
Exon111264   159   IV: 368242-368400 Caenorhabditis elegans
Exon111280   172   IV: 368599-368770 Caenorhabditis elegans
Exon111296   329   IV: 368820-369148 Caenorhabditis elegans
Exon111314   100   IV: 371406-371505 Caenorhabditis elegans
Exon111331   555   IV: 371573-372127 Caenorhabditis elegans
Exon111348   536   IV: 372808-373343 Caenorhabditis elegans
Exon111366   277   IV: 373644-373920 Caenorhabditis elegans
Exon111383   569   IV: 373962-374530 Caenorhabditis elegans
Exon111391   94   IV: 374571-374664 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2t.1 359584 374664 -1

1 Sequence

Length
6378

1 Sequence Ontology Term

Identifier Name Description
transcript