WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y66H1B.2b.1 Sequence Name  Y66H1B.2b.1
Length (nt)  3389   Chromosome Location  IV: 370229-376012
Chromosome . Primary Identifier  IV Chromosome Location . Start  370229
Chromosome Location . End  376012 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y66H1B.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022048 fln-1 Y66H1B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y66H1B.2b Y66H1B.2b 3255   IV: 370363-371090

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2b.1 370229 376012 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111346   862   IV: 370229-371090 Caenorhabditis elegans
Exon111348   100   IV: 371406-371505 Caenorhabditis elegans
Exon111365   555   IV: 371573-372127 Caenorhabditis elegans
Exon111382   536   IV: 372808-373343 Caenorhabditis elegans
Exon111400   277   IV: 373644-373920 Caenorhabditis elegans
Exon111417   563   IV: 373962-374524 Caenorhabditis elegans
Exon111442   174   IV: 374571-374744 Caenorhabditis elegans
Exon111451   172   IV: 375594-375765 Caenorhabditis elegans
Exon111460   114   IV: 375814-375927 Caenorhabditis elegans
Exon111469   36   IV: 375977-376012 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2b.1 370229 376012 -1

1 Sequence

Length
3389

1 Sequence Ontology Term

Identifier Name Description
transcript