WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07A9.10.1 Sequence Name  T07A9.10.1
Length (nt)  1855   Chromosome Location  IV: 390560-393158
Chromosome . Primary Identifier  IV Chromosome Location . Start  390560
Chromosome Location . End  393158 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07A9.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020298 uncp-18 T07A9.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07A9.10 T07A9.10 1689   IV: 390606-390630

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07A9.10.1 390560 393158 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111467   71   IV: 390560-390630 Caenorhabditis elegans
Exon111468   135   IV: 390677-390811 Caenorhabditis elegans
Exon111469   492   IV: 390855-391346 Caenorhabditis elegans
Exon111470   122   IV: 391675-391796 Caenorhabditis elegans
Exon111471   271   IV: 391843-392113 Caenorhabditis elegans
Exon111472   251   IV: 392306-392556 Caenorhabditis elegans
Exon111473   250   IV: 392599-392848 Caenorhabditis elegans
Exon111474   263   IV: 392896-393158 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07A9.10.1 390560 393158 1

1 Sequence

Length
1855

1 Sequence Ontology Term

Identifier Name Description
transcript