WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T07A9.9 Sequence Name  T07A9.9
Length (nt)  2046   Chromosome Location  IV: 394055-394105
Chromosome . Primary Identifier  IV Chromosome Location . Start  394055
Chromosome Location . End  394105
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07A9.9

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE17218 NOG-1 78.5 681 Caenorhabditis elegans
 

Other

27 RNAi

WormBase ID
WBRNAi00095715
WBRNAi00052709
WBRNAi00026224
WBRNAi00099942
WBRNAi00100464
WBRNAi00065038
WBRNAi00091098
WBRNAi00100838
WBRNAi00099336
WBRNAi00099538
WBRNAi00099740
WBRNAi00101130
WBRNAi00102860
WBRNAi00102865
WBRNAi00027864
WBRNAi00097871
WBRNAi00009136
WBRNAi00102863
WBRNAi00106913
WBRNAi00102857
WBRNAi00100090
WBRNAi00100277
WBRNAi00100651
WBRNAi00101025
WBRNAi00101197
WBRNAi00102868
WBRNAi00117846

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T07A9.9 394055 394105 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020297 nog-1 T07A9.9 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:T07A9.9 394055 394105 1
CDS:T07A9.9 394147 394752 1
CDS:T07A9.9 394804 395961 1
CDS:T07A9.9 396018 396248 1

1 Sequence

Length
2046

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T07A9.9.1 T07A9.9.1 2315   IV: 393880-396420
Transcript:T07A9.9.3 T07A9.9.3 2267   IV: 394011-396554
Transcript:T07A9.9.2 T07A9.9.2 2256   IV: 394017-396420