WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07A9.12.2 Sequence Name  T07A9.12.2
Length (nt)  1709   Chromosome Location  IV: 413091-415616
Chromosome . Primary Identifier  IV Chromosome Location . Start  413091
Chromosome Location . End  415616 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07A9.12.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020299 T07A9.12 T07A9.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07A9.12 T07A9.12 438   IV: 414250-414351

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07A9.12.2 413091 415616 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111537   1261   IV: 413091-414351 Caenorhabditis elegans
Exon111544   149   IV: 414442-414590 Caenorhabditis elegans
Exon111548   299   IV: 415318-415616 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07A9.12.2 413091 415616 1

1 Sequence

Length
1709

1 Sequence Ontology Term

Identifier Name Description
transcript