WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T07A9.5a Sequence Name  T07A9.5a
Length (nt)  1347   Chromosome Location  IV: 417081-417338
Chromosome . Primary Identifier  IV Chromosome Location . Start  417081
Chromosome Location . End  417338
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07A9.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE17214 ERI-1, isoform a 52.4 448 Caenorhabditis elegans
 

Other

32 RNAi

WormBase ID
WBRNAi00052703
WBRNAi00018332
WBRNAi00035286
WBRNAi00075619
WBRNAi00084428
WBRNAi00061877
WBRNAi00084430
WBRNAi00084429
WBRNAi00084432
WBRNAi00084431
WBRNAi00084434
WBRNAi00084433
WBRNAi00084436
WBRNAi00084435
WBRNAi00084438
WBRNAi00084437
WBRNAi00084440
WBRNAi00084439
WBRNAi00084442
WBRNAi00084441
WBRNAi00084444
WBRNAi00084443
WBRNAi00084446
WBRNAi00084445
WBRNAi00084448
WBRNAi00084447
WBRNAi00084450
WBRNAi00084449
WBRNAi00084452
WBRNAi00084451

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T07A9.5a 417081 417338 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001332 eri-1 T07A9.5 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:T07A9.5a 417081 417338 -1
CDS:T07A9.5a 417905 418102 -1
CDS:T07A9.5a 418151 418286 -1
CDS:T07A9.5a 418352 418475 -1
CDS:T07A9.5a 418519 418591 -1
CDS:T07A9.5a 419123 419224 -1
CDS:T07A9.5a 419279 419399 -1
CDS:T07A9.5a 419617 419951 -1

1 Sequence

Length
1347

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T07A9.5a.1 T07A9.5a.1 1567   IV: 416868-419958