WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07A9.6.1 Sequence Name  T07A9.6.1
Length (nt)  3333   Chromosome Location  IV: 420011-425177
Chromosome . Primary Identifier  IV Chromosome Location . Start  420011
Chromosome Location . End  425177 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07A9.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000913 daf-18 T07A9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07A9.6 T07A9.6 2889   IV: 420426-420545

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07A9.6.1 420011 425177 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111585   535   IV: 420011-420545 Caenorhabditis elegans
Exon111586   399   IV: 420598-420996 Caenorhabditis elegans
Exon111587   445   IV: 421564-422008 Caenorhabditis elegans
Exon111588   603   IV: 422060-422662 Caenorhabditis elegans
Exon111589   866   IV: 423135-424000 Caenorhabditis elegans
Exon111590   245   IV: 424643-424887 Caenorhabditis elegans
Exon111591   240   IV: 424938-425177 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07A9.6.1 420011 425177 -1

1 Sequence

Length
3333

1 Sequence Ontology Term

Identifier Name Description
transcript