WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07A9.5b.1 Sequence Name  T07A9.5b.1
Length (nt)  1898   Chromosome Location  IV: 415635-419958
Chromosome . Primary Identifier  IV Chromosome Location . Start  415635
Chromosome Location . End  419958 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07A9.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001332 eri-1 T07A9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07A9.5b T07A9.5b 1749   IV: 415777-415958

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07A9.5b.1 415635 419958 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111600   324   IV: 415635-415958 Caenorhabditis elegans
Exon111602   91   IV: 416095-416185 Caenorhabditis elegans
Exon111604   109   IV: 416556-416664 Caenorhabditis elegans
Exon111606   110   IV: 416721-416830 Caenorhabditis elegans
Exon111610   168   IV: 417171-417338 Caenorhabditis elegans
Exon111613   198   IV: 417905-418102 Caenorhabditis elegans
Exon111617   136   IV: 418151-418286 Caenorhabditis elegans
Exon111621   124   IV: 418352-418475 Caenorhabditis elegans
Exon111627   73   IV: 418519-418591 Caenorhabditis elegans
Exon111629   102   IV: 419123-419224 Caenorhabditis elegans
Exon111631   121   IV: 419279-419399 Caenorhabditis elegans
Exon111633   342   IV: 419617-419958 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07A9.5b.1 415635 419958 -1

1 Sequence

Length
1898

1 Sequence Ontology Term

Identifier Name Description
transcript