WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y66H1A.5.1 Sequence Name  Y66H1A.5.1
Length (nt)  960   Chromosome Location  IV: 428070-429133
Chromosome . Primary Identifier  IV Chromosome Location . Start  428070
Chromosome Location . End  429133 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y66H1A.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022047 Y66H1A.5 Y66H1A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y66H1A.5 Y66H1A.5 654   IV: 428251-428474

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1A.5.1 428070 429133 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111643   405   IV: 428070-428474 Caenorhabditis elegans
Exon111644   190   IV: 428522-428711 Caenorhabditis elegans
Exon111645   365   IV: 428769-429133 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1A.5.1 428070 429133 -1

1 Sequence

Length
960

1 Sequence Ontology Term

Identifier Name Description
transcript