WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M04G7.2a.1 Sequence Name  M04G7.2a.1
Length (nt)  1801   Chromosome Location  IV: 458017-460549
Chromosome . Primary Identifier  IV Chromosome Location . Start  458017
Chromosome Location . End  460549 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M04G7.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019773 M04G7.2 M04G7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M04G7.2a M04G7.2a 1653   IV: 458063-458242

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M04G7.2a.1 458017 460549 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111649   226   IV: 458017-458242 Caenorhabditis elegans
Exon111651   581   IV: 458291-458871 Caenorhabditis elegans
Exon111653   205   IV: 459258-459462 Caenorhabditis elegans
Exon111655   316   IV: 459522-459837 Caenorhabditis elegans
Exon111657   213   IV: 459884-460096 Caenorhabditis elegans
Exon111659   140   IV: 460148-460287 Caenorhabditis elegans
Exon111661   120   IV: 460430-460549 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M04G7.2a.1 458017 460549 -1

1 Sequence

Length
1801

1 Sequence Ontology Term

Identifier Name Description
transcript