WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03G1.7a.1 Sequence Name  W03G1.7a.1
Length (nt)  1912   Chromosome Location  IV: 520214-523809
Chromosome . Primary Identifier  IV Chromosome Location . Start  520214
Chromosome Location . End  523809 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03G1.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000213 asm-3 W03G1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03G1.7a W03G1.7a 1770   IV: 520286-520508

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03G1.7a.1 520214 523809 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111778   295   IV: 520214-520508 Caenorhabditis elegans
Exon111780   191   IV: 520557-520747 Caenorhabditis elegans
Exon111782   97   IV: 520794-520890 Caenorhabditis elegans
Exon111784   102   IV: 520936-521037 Caenorhabditis elegans
Exon111786   171   IV: 521090-521260 Caenorhabditis elegans
Exon111788   81   IV: 521798-521878 Caenorhabditis elegans
Exon111790   111   IV: 521931-522041 Caenorhabditis elegans
Exon111792   293   IV: 522090-522382 Caenorhabditis elegans
Exon111794   123   IV: 522756-522878 Caenorhabditis elegans
Exon111796   92   IV: 523034-523125 Caenorhabditis elegans
Exon111799   73   IV: 523341-523413 Caenorhabditis elegans
Exon111802   173   IV: 523473-523645 Caenorhabditis elegans
Exon111803   110   IV: 523700-523809 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03G1.7a.1 520214 523809 -1

1 Sequence

Length
1912

1 Sequence Ontology Term

Identifier Name Description
transcript