WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03G1.1.1 Sequence Name  W03G1.1.1
Length (nt)  1626   Chromosome Location  IV: 532135-535688
Chromosome . Primary Identifier  IV Chromosome Location . Start  532135
Chromosome Location . End  535688 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03G1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001625 glt-7 W03G1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03G1.1 W03G1.1 1626   IV: 532135-532336

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03G1.1.1 532135 535688 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111810   202   IV: 532135-532336 Caenorhabditis elegans
Exon111811   369   IV: 532834-533202 Caenorhabditis elegans
Exon111812   214   IV: 533243-533456 Caenorhabditis elegans
Exon111813   250   IV: 533965-534214 Caenorhabditis elegans
Exon111814   92   IV: 534302-534393 Caenorhabditis elegans
Exon111815   132   IV: 534447-534578 Caenorhabditis elegans
Exon111816   73   IV: 535213-535285 Caenorhabditis elegans
Exon111817   108   IV: 535336-535443 Caenorhabditis elegans
Exon111818   186   IV: 535503-535688 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03G1.1.1 532135 535688 1

1 Sequence

Length
1626

1 Sequence Ontology Term

Identifier Name Description
transcript