WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18H7.12.1 Sequence Name  C18H7.12.1
Length (nt)  1543   Chromosome Location  IV: 583840-587829
Chromosome . Primary Identifier  IV Chromosome Location . Start  583840
Chromosome Location . End  587829 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18H7.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00189987 C18H7.12 C18H7.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18H7.12 C18H7.12 1527   IV: 583840-584460

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18H7.12.1 583840 587829 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111921   621   IV: 583840-584460 Caenorhabditis elegans
Exon111922   159   IV: 585433-585591 Caenorhabditis elegans
Exon111923   124   IV: 585664-585787 Caenorhabditis elegans
Exon111924   192   IV: 586045-586236 Caenorhabditis elegans
Exon111925   287   IV: 587004-587290 Caenorhabditis elegans
Exon111926   82   IV: 587360-587441 Caenorhabditis elegans
Exon111927   78   IV: 587752-587829 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18H7.12.1 583840 587829 -1

1 Sequence

Length
1543

1 Sequence Ontology Term

Identifier Name Description
transcript