WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18H7.8.1 Sequence Name  C18H7.8.1
Length (nt)  989   Chromosome Location  IV: 599449-601695
Chromosome . Primary Identifier  IV Chromosome Location . Start  599449
Chromosome Location . End  601695 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18H7.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015998 srt-59 C18H7.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18H7.8 C18H7.8 933   IV: 599505-599710

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18H7.8.1 599449 601695 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111908   262   IV: 599449-599710 Caenorhabditis elegans
Exon111909   130   IV: 599829-599958 Caenorhabditis elegans
Exon111910   147   IV: 600111-600257 Caenorhabditis elegans
Exon111911   426   IV: 600568-600993 Caenorhabditis elegans
Exon111912   24   IV: 601672-601695 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18H7.8.1 599449 601695 -1

1 Sequence

Length
989

1 Sequence Ontology Term

Identifier Name Description
transcript