WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18H7.6.1 Sequence Name  C18H7.6.1
Length (nt)  1718   Chromosome Location  IV: 589035-592485
Chromosome . Primary Identifier  IV Chromosome Location . Start  589035
Chromosome Location . End  592485 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18H7.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015996 C18H7.6 C18H7.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18H7.6 C18H7.6 1602   IV: 589112-589465

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18H7.6.1 589035 592485 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111928   431   IV: 589035-589465 Caenorhabditis elegans
Exon111929   159   IV: 589547-589705 Caenorhabditis elegans
Exon111930   118   IV: 589751-589868 Caenorhabditis elegans
Exon111931   210   IV: 589936-590145 Caenorhabditis elegans
Exon111932   467   IV: 590886-591352 Caenorhabditis elegans
Exon111933   94   IV: 591401-591494 Caenorhabditis elegans
Exon111934   93   IV: 592010-592102 Caenorhabditis elegans
Exon111935   146   IV: 592340-592485 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18H7.6.1 589035 592485 -1

1 Sequence

Length
1718

1 Sequence Ontology Term

Identifier Name Description
transcript