WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18H7.2a.1 Sequence Name  C18H7.2a.1
Length (nt)  1641   Chromosome Location  IV: 606355-614062
Chromosome . Primary Identifier  IV Chromosome Location . Start  606355
Chromosome Location . End  614062 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18H7.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002140 inx-18 C18H7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18H7.2a C18H7.2a 1311   IV: 606444-606508

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18H7.2a.1 606355 614062 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111919   154   IV: 606355-606508 Caenorhabditis elegans
Exon111922   92   IV: 609131-609222 Caenorhabditis elegans
Exon111925   107   IV: 610911-611017 Caenorhabditis elegans
Exon111928   139   IV: 611069-611207 Caenorhabditis elegans
Exon111931   692   IV: 611652-612343 Caenorhabditis elegans
Exon111934   114   IV: 612958-613071 Caenorhabditis elegans
Exon111938   343   IV: 613720-614062 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18H7.2a.1 606355 614062 1

1 Sequence

Length
1641

1 Sequence Ontology Term

Identifier Name Description
transcript