WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18H7.1a.1 Sequence Name  C18H7.1a.1
Length (nt)  1527   Chromosome Location  IV: 615544-620936
Chromosome . Primary Identifier  IV Chromosome Location . Start  615544
Chromosome Location . End  620936 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18H7.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015993 C18H7.1 C18H7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18H7.1a C18H7.1a 1278   IV: 615595-615621

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18H7.1a.1 615544 620936 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111939   78   IV: 615544-615621 Caenorhabditis elegans
Exon111941   324   IV: 618312-618635 Caenorhabditis elegans
Exon111943   179   IV: 618952-619130 Caenorhabditis elegans
Exon111946   173   IV: 619229-619401 Caenorhabditis elegans
Exon111949   125   IV: 619451-619575 Caenorhabditis elegans
Exon111952   130   IV: 619644-619773 Caenorhabditis elegans
Exon111955   179   IV: 620063-620241 Caenorhabditis elegans
Exon111962   339   IV: 620598-620936 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18H7.1a.1 615544 620936 1

1 Sequence

Length
1527

1 Sequence Ontology Term

Identifier Name Description
transcript