WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41A4.1.1 Sequence Name  F41A4.1.1
Length (nt)  2296   Chromosome Location  IV: 684497-688340
Chromosome . Primary Identifier  IV Chromosome Location . Start  684497
Chromosome Location . End  688340 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41A4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018256 cutl-28 F41A4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41A4.1 F41A4.1 2091   IV: 684505-684675

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41A4.1.1 684497 688340 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112082   179   IV: 684497-684675 Caenorhabditis elegans
Exon112083   145   IV: 684838-684982 Caenorhabditis elegans
Exon112084   124   IV: 685036-685159 Caenorhabditis elegans
Exon112085   143   IV: 685635-685777 Caenorhabditis elegans
Exon112086   148   IV: 685820-685967 Caenorhabditis elegans
Exon112087   131   IV: 686018-686148 Caenorhabditis elegans
Exon112088   61   IV: 686229-686289 Caenorhabditis elegans
Exon112089   112   IV: 686338-686449 Caenorhabditis elegans
Exon112090   87   IV: 686499-686585 Caenorhabditis elegans
Exon112091   317   IV: 686802-687118 Caenorhabditis elegans
Exon112092   91   IV: 687168-687258 Caenorhabditis elegans
Exon112093   758   IV: 687583-688340 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41A4.1.1 684497 688340 1

1 Sequence

Length
2296

1 Sequence Ontology Term

Identifier Name Description
transcript