WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y55F3C.3e Sequence Name  Y55F3C.3e
Length (nt)  1590   Chromosome Location  IV: 748707-748738
Chromosome . Primary Identifier  IV Chromosome Location . Start  748707
Chromosome Location . End  748738
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3C.3e

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48733 KVS-5, isoform e 60.1 529 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00002374
WBRNAi00057555
WBRNAi00021057

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:Y55F3C.3e 748707 748738 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021948 kvs-5 Y55F3C.3 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier 		Start End Strand
CDS:Y55F3C.3e 748707 748738 1
CDS:Y55F3C.3e 748813 748914 1
CDS:Y55F3C.3e 748969 749138 1
CDS:Y55F3C.3e 749514 749607 1
CDS:Y55F3C.3e 749791 749971 1
CDS:Y55F3C.3e 750200 750292 1
CDS:Y55F3C.3e 751088 751288 1
CDS:Y55F3C.3e 751381 751434 1
CDS:Y55F3C.3e 751583 751684 1
CDS:Y55F3C.3e 751872 752064 1
CDS:Y55F3C.3e 752115 752277 1
CDS:Y55F3C.3e 752679 752805 1
CDS:Y55F3C.3e 752851 752928 1

1 Sequence

Length
1590

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y55F3C.3e.1 Y55F3C.3e.1 1590   IV: 748707-752928