WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56B3.2.1 Sequence Name  F56B3.2.1
Length (nt)  1593   Chromosome Location  IV: 764061-768584
Chromosome . Primary Identifier  IV Chromosome Location . Start  764061
Chromosome Location . End  768584 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56B3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018928 F56B3.2 F56B3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56B3.2 F56B3.2 1299   IV: 764178-764284

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56B3.2.1 764061 768584 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112272   224   IV: 764061-764284 Caenorhabditis elegans
Exon112273   157   IV: 764687-764843 Caenorhabditis elegans
Exon112274   293   IV: 765335-765627 Caenorhabditis elegans
Exon112275   123   IV: 765673-765795 Caenorhabditis elegans
Exon112276   160   IV: 766470-766629 Caenorhabditis elegans
Exon112277   227   IV: 766686-766912 Caenorhabditis elegans
Exon112279   62   IV: 767822-767883 Caenorhabditis elegans
Exon112280   82   IV: 767951-768032 Caenorhabditis elegans
Exon112281   265   IV: 768320-768584 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56B3.2.1 764061 768584 -1

1 Sequence

Length
1593

1 Sequence Ontology Term

Identifier Name Description
transcript