WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56B3.8a.1 Sequence Name  F56B3.8a.1
Length (nt)  1078   Chromosome Location  IV: 773237-776655
Chromosome . Primary Identifier  IV Chromosome Location . Start  773237
Chromosome Location . End  776655 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56B3.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018932 mrpl-2 F56B3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56B3.8a F56B3.8a 966   IV: 773237-773293

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56B3.8a.1 773237 776655 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112296   57   IV: 773237-773293 Caenorhabditis elegans
Exon112297   224   IV: 773356-773579 Caenorhabditis elegans
Exon112298   135   IV: 773653-773787 Caenorhabditis elegans
Exon112299   111   IV: 774547-774657 Caenorhabditis elegans
Exon112300   213   IV: 775529-775741 Caenorhabditis elegans
Exon112301   338   IV: 776318-776655 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56B3.8a.1 773237 776655 1

1 Sequence

Length
1078

1 Sequence Ontology Term

Identifier Name Description
transcript