WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56B3.4a.1 Sequence Name  F56B3.4a.1
Length (nt)  1991   Chromosome Location  IV: 786234-794275
Chromosome . Primary Identifier  IV Chromosome Location . Start  786234
Chromosome Location . End  794275 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56B3.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004824 F56B3.4 F56B3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56B3.4a F56B3.4a 1899   IV: 786324-786479

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56B3.4a.1 786234 794275 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112312   246   IV: 786234-786479 Caenorhabditis elegans
Exon112316   205   IV: 786895-787099 Caenorhabditis elegans
Exon112322   509   IV: 791913-792421 Caenorhabditis elegans
Exon112324   79   IV: 792639-792717 Caenorhabditis elegans
Exon112326   119   IV: 793198-793316 Caenorhabditis elegans
Exon112329   833   IV: 793443-794275 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56B3.4a.1 786234 794275 -1

1 Sequence

Length
1991

1 Sequence Ontology Term

Identifier Name Description
transcript