WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55F3BR.11.1 Sequence Name  Y55F3BR.11.1
Length (nt)  901   Chromosome Location  IV: 855219-856852
Chromosome . Primary Identifier  IV Chromosome Location . Start  855219
Chromosome Location . End  856852 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3BR.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044757 Y55F3BR.11 Y55F3BR.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3BR.11 Y55F3BR.11 378   IV: 855725-855815

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y55F3BR.11.1 855219 856852 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112435   597   IV: 855219-855815 Caenorhabditis elegans
Exon112436   113   IV: 855902-856014 Caenorhabditis elegans
Exon112437   191   IV: 856662-856852 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y55F3BR.11.1 855219 856852 1

1 Sequence

Length
901

1 Sequence Ontology Term

Identifier Name Description
transcript