WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y55F3BR.2a Sequence Name  Y55F3BR.2a
Length (nt)  4650   Chromosome Location  IV: 858932-858980
Chromosome . Primary Identifier  IV Chromosome Location . Start  858932
Chromosome Location . End  858980
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3BR.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48501 Y55F3BR.2, isoform a 167.7 1549 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00057543
WBRNAi00057544
WBRNAi00057545
WBRNAi00021025
WBRNAi00021050
WBRNAi00021051
WBRNAi00026860
WBRNAi00026861
WBRNAi00082228
WBRNAi00082221
WBRNAi00027535

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y55F3BR.2a 858932 858980 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021939 Y55F3BR.2 Y55F3BR.2 Caenorhabditis elegans

23 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y55F3BR.2a 858932 858980 1
CDS:Y55F3BR.2a 859031 859154 1
CDS:Y55F3BR.2a 859780 859934 1
CDS:Y55F3BR.2a 860128 860250 1
CDS:Y55F3BR.2a 860776 860899 1
CDS:Y55F3BR.2a 860950 861059 1
CDS:Y55F3BR.2a 861107 861219 1
CDS:Y55F3BR.2a 862099 862402 1
CDS:Y55F3BR.2a 863222 863374 1
CDS:Y55F3BR.2a 864027 864266 1
CDS:Y55F3BR.2a 864934 865059 1
CDS:Y55F3BR.2a 865734 865907 1
CDS:Y55F3BR.2a 866063 866295 1
CDS:Y55F3BR.2a 866540 866630 1
CDS:Y55F3BR.2a 866684 866824 1
CDS:Y55F3BR.2a 866874 866943 1
CDS:Y55F3BR.2a 868662 869242 1
CDS:Y55F3BR.2a 870182 870685 1
CDS:Y55F3BR.2a 871564 871713 1
CDS:Y55F3BR.2a 871831 871951 1
CDS:Y55F3BR.2a 872494 873155 1
CDS:Y55F3BR.2a 873857 874102 1
CDS:Y55F3BR.2a 874474 874529 1

1 Sequence

Length
4650

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y55F3BR.2a.1 Y55F3BR.2a.1 4847   IV: 858930-874724