WormMine: Gene WBGene00201671

• WormBase Gene ID: WBGene00201671
• Gene Name: Y55F3BR.17
• Sequence Name: Y55F3BR.17
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by hmg-3 and ogt-1 based on RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 136

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00201671

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:Y55F3BR.17	Y55F3BR.17	136	IV: 867080-867215

Other

0 CDSs

0 RNAi Result

11 Allele

• gk963722
• gk963025
• gk963557
• gk963558
• gk964114
• gk964115
• gk193013
• gk193012
• gk790779
• gk927107
• gk476132

1 Chromosome

• WormBase ID: IV
• Organism: Caenorhabditis elegans
• Length (nt): 17493829

1 Chromosome Location

• Feature . Primary Identifier: WBGene00201671
• Start: 867080
• End: 867215
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly decreased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066485:ogt-1(ok1474)_downregulated_neuron
	Transcripts that interact with HMG-3-HA in BAT1753 [hmg-3(bar24[hmg-3-3xHA]) I] at L4 larva stage.	N.A.	WBPaper00055013:HMG-3_interacting_transcript

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00201671
• Start: 867080
• End: 867215
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 136

1 Sequence Ontology Term