WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44C8.6.2 Sequence Name  C44C8.6.2
Length (nt)  1594   Chromosome Location  IV: 885344-890188
Chromosome . Primary Identifier  IV Chromosome Location . Start  885344
Chromosome Location . End  890188 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44C8.6.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007007 mak-2 C44C8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44C8.6 C44C8.6 1101   IV: 886563-886613

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44C8.6.2 885344 890188 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112498   78   IV: 885344-885421 Caenorhabditis elegans
Exon112500   172   IV: 886442-886613 Caenorhabditis elegans
Exon112503   380   IV: 887289-887668 Caenorhabditis elegans
Exon112505   189   IV: 888073-888261 Caenorhabditis elegans
Exon112507   125   IV: 888313-888437 Caenorhabditis elegans
Exon112509   287   IV: 888558-888844 Caenorhabditis elegans
Exon112510   363   IV: 889826-890188 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44C8.6.2 885344 890188 1

1 Sequence

Length
1594

1 Sequence Ontology Term

Identifier Name Description
transcript