WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58H7.3.1 Sequence Name  F58H7.3.1
Length (nt)  1818   Chromosome Location  IV: 924882-939736
Chromosome . Primary Identifier  IV Chromosome Location . Start  924882
Chromosome Location . End  939736 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58H7.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019069 lgc-30 F58H7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58H7.3 F58H7.3 1590   IV: 924936-925002

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58H7.3.1 924882 939736 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112555   121   IV: 924882-925002 Caenorhabditis elegans
Exon112558   136   IV: 928382-928517 Caenorhabditis elegans
Exon112559   109   IV: 928883-928991 Caenorhabditis elegans
Exon112560   214   IV: 929492-929705 Caenorhabditis elegans
Exon112561   95   IV: 930216-930310 Caenorhabditis elegans
Exon112570   87   IV: 936642-936728 Caenorhabditis elegans
Exon112571   150   IV: 937061-937210 Caenorhabditis elegans
Exon112572   76   IV: 937350-937425 Caenorhabditis elegans
Exon112573   221   IV: 937955-938175 Caenorhabditis elegans
Exon112574   171   IV: 938613-938783 Caenorhabditis elegans
Exon112575   52   IV: 939252-939303 Caenorhabditis elegans
Exon112576   386   IV: 939351-939736 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58H7.3.1 924882 939736 1

1 Sequence

Length
1818

1 Sequence Ontology Term

Identifier Name Description
transcript