WormMine: MRNA Transcript:Y55F3AL.1a.1

• WormMine ID: Transcript:Y55F3AL.1a.1
• Sequence Name: Y55F3AL.1a.1
• Length (nt): 6524
• Chromosome Location: IV: 959521-984395
• Chromosome . Primary Identifier: IV
• Chromosome Location . Start: 959521
• Chromosome Location . End: 984395
• Method: Coding_transcript

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: Y55F3AL.1a.1

Genomics

1 Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00004047	plx-1	Y55F3AL.1	Caenorhabditis elegans

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:Y55F3AL.1a	Y55F3AL.1a	5838	IV: 959521-959658

1 Chromosome

• WormBase ID: IV
• Organism: Caenorhabditis elegans
• Length (nt): 17493829

1 Chromosome Location

• Feature . Primary Identifier: Transcript:Y55F3AL.1a.1
• Start: 959521
• End: 984395
• Strand: 1

3 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)
• WormBase C. elegans transcript sequence (Fasta)

24 Exons

WormBase ID	Name	Sequence Name	Length (nt)	Chromosome Location	Organism
Exon112585			138	IV: 959521-959658	Caenorhabditis elegans
Exon112587			130	IV: 960846-960975	Caenorhabditis elegans
Exon112589			116	IV: 963030-963145	Caenorhabditis elegans
Exon112591			302	IV: 964140-964441	Caenorhabditis elegans
Exon112595			246	IV: 965737-965982	Caenorhabditis elegans
Exon112599			266	IV: 967066-967331	Caenorhabditis elegans
Exon112603			137	IV: 967901-968037	Caenorhabditis elegans
Exon112607			317	IV: 968662-968978	Caenorhabditis elegans
Exon112611			254	IV: 969803-970056	Caenorhabditis elegans
Exon112615			182	IV: 971064-971245	Caenorhabditis elegans
Exon112619			108	IV: 971307-971414	Caenorhabditis elegans
Exon112623			107	IV: 971876-971982	Caenorhabditis elegans
Exon112627			550	IV: 972373-972922	Caenorhabditis elegans
Exon112633			151	IV: 973764-973914	Caenorhabditis elegans
Exon112639			172	IV: 974470-974641	Caenorhabditis elegans
Exon112645			126	IV: 975269-975394	Caenorhabditis elegans
Exon112651			150	IV: 975450-975599	Caenorhabditis elegans
Exon112657			460	IV: 976199-976658	Caenorhabditis elegans
Exon112663			510	IV: 977242-977751	Caenorhabditis elegans
Exon112669			354	IV: 978858-979211	Caenorhabditis elegans
Exon112675			126	IV: 980654-980779	Caenorhabditis elegans
Exon112681			434	IV: 981560-981993	Caenorhabditis elegans
Exon112687			388	IV: 982729-983116	Caenorhabditis elegans
Exon112698			800	IV: 983596-984395	Caenorhabditis elegans

1 Locations

• Feature . Primary Identifier: Transcript:Y55F3AL.1a.1
• Start: 959521
• End: 984395
• Strand: 1

1 Sequence

• Length: 6524

1 Sequence Ontology Term

• Name: transcript