WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y55F3AM.7e Sequence Name  Y55F3AM.7e
Length (nt)  849   Chromosome Location  IV: 984754-984819
Chromosome . Primary Identifier  IV Chromosome Location . Start  984754
Chromosome Location . End  984819
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3AM.7e

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54246 EGRH-2, isoform e 32.0 282 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00057533
WBRNAi00021027

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y55F3AM.7e 984754 984819 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00043705 egrh-2 Y55F3AM.7 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y55F3AM.7e 984754 984819 -1
CDS:Y55F3AM.7e 985668 985823 -1
CDS:Y55F3AM.7e 988200 988325 -1
CDS:Y55F3AM.7e 988383 988456 -1
CDS:Y55F3AM.7e 989300 989370 -1
CDS:Y55F3AM.7e 989421 989577 -1
CDS:Y55F3AM.7e 990241 990439 -1

1 Sequence

Length
849

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y55F3AM.7e.1 Y55F3AM.7e.1 1179   IV: 984424-990439