WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y55F3AM.5 Sequence Name  Y55F3AM.5
Length (nt)  1098   Chromosome Location  IV: 999230-999366
Chromosome . Primary Identifier  IV Chromosome Location . Start  999230
Chromosome Location . End  999366
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3AM.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45583 Y55F3AM.5 41.4 365 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00057531
WBRNAi00021032

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y55F3AM.5 999230 999366 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021923 Y55F3AM.5 Y55F3AM.5 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y55F3AM.5 999230 999366 1
CDS:Y55F3AM.5 999561 999693 1
CDS:Y55F3AM.5 1000002 1000070 1
CDS:Y55F3AM.5 1000117 1000203 1
CDS:Y55F3AM.5 1000766 1000982 1
CDS:Y55F3AM.5 1002046 1002261 1
CDS:Y55F3AM.5 1002318 1002451 1
CDS:Y55F3AM.5 1003394 1003498 1

1 Sequence

Length
1098

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y55F3AM.5.1 Y55F3AM.5.1 1242   IV: 999214-1003626