WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y55F3AM.9a Sequence Name  Y55F3AM.9a
Length (nt)  1140   Chromosome Location  IV: 1006321-1006564
Chromosome . Primary Identifier  IV Chromosome Location . Start  1006321
Chromosome Location . End  1006564
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3AM.9a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25491 Y55F3AM.9, isoform a 42.0 379 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00057535
WBRNAi00021031
WBRNAi00037522
WBRNAi00062457

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y55F3AM.9a 1006321 1006564 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021926 Y55F3AM.9 Y55F3AM.9 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y55F3AM.9a 1006321 1006564 -1
CDS:Y55F3AM.9a 1007294 1007415 -1
CDS:Y55F3AM.9a 1007537 1007754 -1
CDS:Y55F3AM.9a 1008507 1008604 -1
CDS:Y55F3AM.9a 1008853 1009045 -1
CDS:Y55F3AM.9a 1009281 1009383 -1
CDS:Y55F3AM.9a 1009434 1009535 -1
CDS:Y55F3AM.9a 1009602 1009661 -1

1 Sequence

Length
1140

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y55F3AM.9a.1 Y55F3AM.9a.1 1451   IV: 1006083-1009734